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Promex 2.12/2013

Promex is a mass spectral reference database. The database consists of tryptic peptide fragmentation mass spectra derived from plants.

This release 2.12/2013 contains 116,364 tryptic peptide product ion spectra entries of 48,218 different peptide sequence entries from Medicago truncatula, Chlamydomonas reinhardtii, Bradyrhizobium japonicum, Arabidopsis thaliana, Phaseolus vulgaris, Lotus japonicus, Lotus corniculatus, Lycopersicon esculentum, Solanum tuberosum, Nicotiana tabacum, Sinorhizobium meliloti, Glycine max, Zea mays.

Ion series abcxyz
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We will keep working on the program interface and usability improvement. The ProMEX database is continuously updated with new in-house generated data.

Please cite the following article when using Promex.

Wienkoop S, Staudinger C, Hoehenwarter W, Weckwerth W and Egelhofer V (2012)
ProMEX – a mass spectral reference database for plant proteomics.
Front. Plant Sci. 3:125. doi:10.3389/fpls.2012.00125


Arabidopsis thaliana
A. thaliana


Zea mays
Zea mays


Chlamydomonas reinhardtii
C. reinhardtii


Lotus corniculatus
L. corniculatus
Lotus japonicus
L. japonicus
Phaseolus vulgaris
P. vulgaris
Medicago truncatula
M. truncatula
Glycine max
Glycine max


Nicotiana tabacum
N. tabacum
Solanum tuberosum
S. tuberosum
Lycopersicon esculentum
L. esculentum


Sinorhizobium meliloti
S. meliloti
Bradyrhizobium japonicum
B. japonicum